1. ERGO Genome Analysis and Discovery System
ERGO provides a systems-biology informatics toolkit centered on comparative genomics to capture, query and visualize sequenced genomes. Building upon the most comprehensive genomic database available anywhere integrated with the largest collection of microbial metabolic and non-metaboli...
标签:Metabolic reconstruction,Phylogenetics, Comparative genomics, SNP Annotation, SNP discovery, Alignment, Exome analysis, Metagenomics,Pathway analysis, Comparative transcriptomics, Functional Genomics, Gene Expression Analysis, Genome Wide Association Stud
2. VIP
A complete package designed for next-generation diagnostics using 454 sequencing.
标签:Genomics, SNP discovery, SNP Annotation
3. GAMES
GAMES (Genomic Analysis of Mutations Extracted by Sequencing) is a tool for mining and prediction of functional effect of mutation.
标签:SNP discovery, SNP Annotation,InDel discovery
4. Variation toolkit
A set of C++ tools for the interpretation of VCF data.
标签:Genomics, Exome and whole genome variant detection, SNP Annotation